Difference between revisions of "Task 4 Protocol"
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== Datasets == |
== Datasets == |
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| − | In order to generate the datasets to build the models from we used both the HHpred and COMA web-server. Both tools were applied with default settings. As input sequence the [[Reference sequence (uniprot)]] of BCKDHA was used. As cutoff we only used sequences with an e-vaule smaller than 1e- |
+ | In order to generate the datasets to build the models from we used both the HHpred and COMA web-server. Both tools were applied with default settings. As input sequence the [[Reference sequence (uniprot)]] of BCKDHA was used. As cutoff we only used sequences with an e-vaule smaller than 1e-15. |
Raw output files can be found under: |
Raw output files can be found under: |
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*[http://toolkit.tuebingen.mpg.de/hhpred/results/4987851 HHpred] |
*[http://toolkit.tuebingen.mpg.de/hhpred/results/4987851 HHpred] |
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Revision as of 15:39, 30 May 2012
Datasets
In order to generate the datasets to build the models from we used both the HHpred and COMA web-server. Both tools were applied with default settings. As input sequence the Reference sequence (uniprot) of BCKDHA was used. As cutoff we only used sequences with an e-vaule smaller than 1e-15. Raw output files can be found under:
