Difference between revisions of "Secondary Structure Prediction BCKDHA"
From Bioinformatikpedia
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Revision as of 14:22, 24 May 2011
Contents
1. Secondary structure prediction
2. Prediction of disordered regions
3. Prediction of transmembrane alpha-helices and signal peptides
Transmembrane topology and signal peptides are features that are likely to be conserved during evolution.
Phobius
Phobius predicted a signal peptide with about 90% probability at the beginning of the sequence. The predicted signal peptide is 34 amino acids long. The rest of the amino acid is a non cytoplasmic protein sequence. No part of the protein is predicted to be transmembrane spanning.
P12694|ODBA_HUMAN (BCKDHA) | |||
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Signal | 1 | 34 | |
Region | 1 | 16 | N-Region |
Region | 17 | 25 | H-Region |
Region | 26 | 34 | C-Region |
TOPO_DOM | 35 | 445 | non cytoplasmic |
Polyphobius
colspan=4 OBDA_HUMAN (BCKDHA) | |||
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TOPO_DOM | 1 | 445 | Non cytoplasmic |