Difference between revisions of "AllBio Forum"
From Bioinformatikpedia
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== Annotation Pipelines == |
== Annotation Pipelines == |
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| − | + | * Trinotate (Agnieszka + Didi+ Oren) output: done | parsing: done. |
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| − | + | * Blast2GO (Estelle ??) output: done | parsing: done??. |
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| − | + | * PotatoCyc (Kate) output: done | parsing: MISSING??. |
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| − | + | * OrthoMCL (Tanya + Esstelle): output: MISSING for 52 proteomes | parsing: MISSING. |
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| − | + | * Phytozome (Itziar) output: done| parsing: done. |
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| − | + | * KEGG (Itziar contacted the KEGG people?) output: done?? | parsing: done??. |
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== Data production status == |
== Data production status == |
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Revision as of 12:19, 23 September 2013
This wiki was created after the first Hack-a-Thon Session for Test Cases #9 and #12, held in Amsterdam, September 19-21. For general information about this Session please refer to the AllBio website. The discussion board will be used by all members of the Hack-a-thon team for a regular update on project's status.
Contents
What's new
- Wiki is up! [Sept 23, 2013]
Annotation Pipelines
- Trinotate (Agnieszka + Didi+ Oren) output: done | parsing: done.
- Blast2GO (Estelle ??) output: done | parsing: done??.
- PotatoCyc (Kate) output: done | parsing: MISSING??.
- OrthoMCL (Tanya + Esstelle): output: MISSING for 52 proteomes | parsing: MISSING.
- Phytozome (Itziar) output: done| parsing: done.
- KEGG (Itziar contacted the KEGG people?) output: done?? | parsing: done??.
Data production status
This section provides information on data collected, processed, completed or not yet completed.
Data Analysis and Integration
Please put your data analysis results into this section Data Analysis and Integration.
TO DO Lists
September 2013
- Task 1: ....
- Task 2: ....
Contacts
For any question regarding editing of this WikiMedia page please contact Tatyana Goldberg
