Difference between revisions of "Lab Journal - Task 9 (PAH)"
From Bioinformatikpedia
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| + | == structure selection == |
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| + | The information for the resolution, chain and the positions in PAH can be found on the UniProt entry [http://www.uniprot.org/uniprot/P00439 P00439] itself. The R-factor for the proteins, can be found on the PDBsum entries and the pH values on the [http://www.rcsb.org/pdb/explore/materialsAndMethods.do?structureId=1DMW pdb] entries in the method section. |
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| + | To check if a gap is included in a structure, we first downloaded the pdb file in text format from the [http://www.rcsb.org/pdb/explore/explore.do?structureId=1dmw pdb] website and then used following unix shell-commands: |
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| + | ... |
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[[Category: Phenylketonuria 2013]] |
[[Category: Phenylketonuria 2013]] |
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Revision as of 16:17, 30 July 2013
structure selection
The information for the resolution, chain and the positions in PAH can be found on the UniProt entry P00439 itself. The R-factor for the proteins, can be found on the PDBsum entries and the pH values on the pdb entries in the method section.
To check if a gap is included in a structure, we first downloaded the pdb file in text format from the pdb website and then used following unix shell-commands:
...
