Difference between revisions of "Task 7: Research SNPs"

Revision as of 19:36, 23 June 2013

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HGMD

synonymous SNPS in coding region of isoform 1 human and transcript variant 1

cluster ID	MAF	SNP allel	residue	codon position	aa position
rs114758821	9E-4	G -> A	Pro	3	7
rs147297176	5E-4	C -> T	Phe	3	58
rs147426902	3.2E-3	T -> C	His	3	63
rs62625342	5E-4	C -> T	Ser	3	76
rs148480830	-	C -> G	Ala	3	162
rs182920795	5E-4	T -> A	Pro	3	253
rs201310322	-	C -> T	Pro	3	292
rs114038675	5E-4	G -> A	Glu	3	298
rs148632352	-	T -> C	Val	3	315
rs35201683	6.4E-3	C -> T	Tyr	3	342

@@ Line 83: / Line 83: @@
 == Comparison of databases ==
-{| class="colBasic2"
-|! ||
+{| class="colBasic2"
+|! database || last update || version || # ns SNPs || # s SNPs || # disease causing SNPs || # SNPs in UTR || total
+|-
+| HGMD || || || || || || ||
+|-
+| dbSNP || || || || || || ||
 |-
+| SNPdbe || || || || || || ||
-| ||
 |}