Difference between revisions of "Homology based structure prediction (Phenylketonuria)"
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=== iTasser === |
=== iTasser === |
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| + | [http://zhanglab.ccmb.med.umich.edu/I-TASSER/ iTasser]... <ref name="itasser"> Yang Zhang (2008): "[zhanglab.ccmb.med.umich.edu/papers/2008_2.pdf I-TASSER server for protein 3D structure prediction]". BMC Bioinformatics Vol.9: 40. [http://en.wikipedia.org/wiki/Digital_object_identifier doi]:[http://www.biomedcentral.com/1471-2105/9/40/ 10.1186/1471-2105-9-40] </ref> |
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| − | [http://zhanglab.ccmb.med.umich.edu/I-TASSER/ iTasser]... |
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== Model evaluation == |
== Model evaluation == |
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Revision as of 16:55, 5 June 2013
Contents
Summary
...
Model calculation
Lab journal
...
Modeller
<figure id="mod_1j8u">
</figure>
As 1j8u has 100% sequence identity we also tried a second one 2phm. <figure id="mod_2phm">
</figure>
<figure id="mod_3luy">
</figure>
Swissmodel
SwissModel ... <ref name="swissmodel"> Konstantin Arnold, Lorenza Bordoli, Jürgen Kopp and Torsten Schwede (2006): "The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling". Bioinformatics Vol.22(2): 195-201. doi:10.1093/bioinformatics/bti770 </ref>
iTasser
iTasser... <ref name="itasser"> Yang Zhang (2008): "[zhanglab.ccmb.med.umich.edu/papers/2008_2.pdf I-TASSER server for protein 3D structure prediction]". BMC Bioinformatics Vol.9: 40. doi:10.1186/1471-2105-9-40 </ref>
Model evaluation
...
References
<references/>
