Difference between revisions of "Homology based structure prediction (Phenylketonuria)"

From Bioinformatikpedia
(Modeller)
(Swissmodel)
Line 32: Line 32:
   
 
=== Swissmodel ===
 
=== Swissmodel ===
  +
[http://swissmodel.expasy.org/workspace/index.php?func=modelling_simple1&userid=USERID&token=TOKEN SwissModel] ... <ref name="swissmodel"> Konstantin Arnold, Lorenza Bordoli, Jürgen Kopp and Torsten Schwede (2006): "[http://bioinformatics.oxfordjournals.org/content/22/2/195.full The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling]". Bioinformatics Vol.22(2): 195-201. [http://en.wikipedia.org/wiki/Digital_object_identifier doi]:[http://bioinformatics.oxfordjournals.org/content/22/2/195.full 10.1093/bioinformatics/bti770] </ref>
...
 
   
 
=== iTasser ===
 
=== iTasser ===

Revision as of 16:48, 5 June 2013

Summary

...

Model calculation

Lab journal
...

Modeller

<figure id="mod_1j8u">

Structure of target 2pah (green) and template 1j8u (purple) superimposed. For the creation of the superimpsed structutre modeller was used.

</figure>












Swissmodel

SwissModel ... <ref name="swissmodel"> Konstantin Arnold, Lorenza Bordoli, Jürgen Kopp and Torsten Schwede (2006): "The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling". Bioinformatics Vol.22(2): 195-201. doi:10.1093/bioinformatics/bti770 </ref>

iTasser

...

Model evaluation

...

References

<references/>