Difference between revisions of "Sequence-based predictions"
From Bioinformatikpedia
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+ | |GO:0004872 || Molecular Function || 91% || receptor activity |
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| − | |GO:0030106 || |
+ | |GO:0030106 || Molecular Function || 88% || MHC class I receptor activity |
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Revision as of 15:05, 31 May 2011
Contents
Sequence-based predictions
1. Secondary structure prediction
PSIPRED
Jpred3
Comparison with DSSP
2. Prediction of disordered regions
DISOPRED
POODLE
IUPRED
3. Prediction of transmembrane alpha-helices and signal peptides
TMHMM
Phobius and PolyPhobius
OCTOPUS and SPOCTOPUS
SignalP
TargetP
4. Prediction of GO terms
GOPET
| GOID | Aspect | Confidence | GO Term |
|---|---|---|---|
| GO:0004872 | Molecular Function | 91% | receptor activity |
| GO:0030106 | Molecular Function | 88% | MHC class I receptor activity |
