Difference between revisions of "Sequence-based predictions"
From Bioinformatikpedia
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|GO:0004872 || F || 91% || receptor activity |
|GO:0004872 || F || 91% || receptor activity |
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− | GO:0030106 || F || 88% || MHC class I receptor activity |
+ | |GO:0030106 || F || 88% || MHC class I receptor activity |
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Revision as of 15:05, 31 May 2011
Contents
Sequence-based predictions
1. Secondary structure prediction
PSIPRED
Jpred3
Comparison with DSSP
2. Prediction of disordered regions
DISOPRED
POODLE
IUPRED
3. Prediction of transmembrane alpha-helices and signal peptides
TMHMM
Phobius and PolyPhobius
OCTOPUS and SPOCTOPUS
SignalP
TargetP
4. Prediction of GO terms
GOPET
GOID | Aspect | Confidence | GO Term |
---|---|---|---|
GO:0004872 | F | 91% | receptor activity |
GO:0030106 | F | 88% | MHC class I receptor activity |