Difference between revisions of "MSUP-task7-journal"
From Bioinformatikpedia
(→Scwrl) |
(→Scwrl) |
||
| Line 13: | Line 13: | ||
empaqlrkqqeslaHhlqtygehypldhfdK |
empaqlrkqqeslaHhlqtygehypldhfdK |
||
| − | + | posmap: |
|
| + | |||
| − | |||
<table border=1> |
<table border=1> |
||
<tr><td>snp-pos</td><td>pdb-pos-mapping</td></tr> |
<tr><td>snp-pos</td><td>pdb-pos-mapping</td></tr> |
||
Revision as of 13:20, 20 June 2012
Scwrl
Sequence extraction from pdb-file:
/opt/SS12-Practical/scripts/repairPDB 2bfd_A.ent -chain A -seq
sequence mutated: kpqfpgasaefidklefiqpSvisgipiyrvIdrqgqiinpsedphlp kekvlklyksmtllntmdrilyesqrEgrisfymtnygegtvgsaaal dntdlvfgareagvlmyrdyplelfmaqcygnisdlgkgrqpvygcke rhfvtissplatqTpqavgaayaakrananrvvicyfgegaasegdah agfnfaatleYpiiffcrnngyaistptseqyrgdgiaargpgygims irvdgndvfavynaRkearrravaenqpflieTmtyrigstdhpVsrl rhylqgwwdeeqekawrkqsrrkvmeafeqaerkpkpSpnllfsdvyq empaqlrkqqeslaHhlqtygehypldhfdK
posmap:
| snp-pos | pdb-pos-mapping |
| N71S | N21S |
| M82I | M32I |
| Q125E | Q75E |
| I213T | I158T |
| C258Y | C203Y |
| T310R | T255R |
| A328T | A273T |
| I361V | I285V |
| N404S | N326S |
| R429H | R351H |
