Difference between revisions of "Task 3: Sequence-based predictions"

From Bioinformatikpedia
(Task 3.3: Prediction of transmembrane alpha-helices and signal peptides)
Line 14: Line 14:
 
== Task 3.3: Prediction of transmembrane alpha-helices and signal peptides ==
 
== Task 3.3: Prediction of transmembrane alpha-helices and signal peptides ==
   
  +
=== TMHMM ===
   
  +
=== Phobius and PolyPhobius ===
  +
  +
=== OCTOPUS and SPOCTOPUS ===
  +
  +
=== SignalP ===
  +
  +
=== TargetP ===
   
 
== Task 3.4: Prediction of GO terms ==
 
== Task 3.4: Prediction of GO terms ==

Revision as of 14:38, 25 May 2011

Task description

The full description of this task can be found here.


Task 3.1: Secondary structure prediction

Task 3.2: Prediction of disordered regions

Task 3.3: Prediction of transmembrane alpha-helices and signal peptides

TMHMM

Phobius and PolyPhobius

OCTOPUS and SPOCTOPUS

SignalP

TargetP

Task 3.4: Prediction of GO terms