Difference between revisions of "Fabry:Sequence-based analyses"

From Bioinformatikpedia
(GOPET)
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Searching the GOPET annotation tool with the AGAL_HUMAN [[Alpha-galactosidase_sequence|sequence]] revealed 5 GOIds, which are displayed in <xr id="Tab:GOPET"/>..
 
Searching the GOPET annotation tool with the AGAL_HUMAN [[Alpha-galactosidase_sequence|sequence]] revealed 5 GOIds, which are displayed in <xr id="Tab:GOPET"/>..
   
<table>
 
 
{| style="border-collapse: collapse; border-width: 1px; border-style: solid; border-color: #000" id="Tab:GOPET"
 
{| style="border-collapse: collapse; border-width: 1px; border-style: solid; border-color: #000" id="Tab:GOPET"
! style="border-style: solid; border-width: 1px"| colspan="6"|Result for GOPET search
+
! style="border-style: solid; border-width: 1px;" colspan="6"|Result for GOPET search
 
|-
 
|-
 
! style="border-style: solid; border-width: 1px"| GOid
 
! style="border-style: solid; border-width: 1px"| GOid
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|}
 
|}
 
</table>
 
   
 
=== ProtFun2.0 ===
 
=== ProtFun2.0 ===

Revision as of 18:49, 8 May 2012

The following analyses were performed on the basis of the α-Galactosidase A sequence.

Secondary structure

Disorder

Transmembrane helices

Signal peptides

GO terms

GOPET

Searching the GOPET annotation tool with the AGAL_HUMAN sequence revealed 5 GOIds, which are displayed in <xr id="Tab:GOPET"/>..

Result for GOPET search
GOid Aspect Confidence GO term
GO:0016798 Molecular Function Ontology (F) 98% hydrolase activity acting on glycosyl bonds

ProtFun2.0

Pfam