Difference between revisions of "Fabry:Sequence-based analyses"

From Bioinformatikpedia
m (GOPET)
(GOPET)
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<table>
 
<table>
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{| style="border-collapse: collapse; border-width: 1px; border-style: solid; border-color: #000" id="Tab:GOPET"
{| class="wikitable" id="Tab:GOPET"
 
!colspan="6"|Result for GOPET search
+
! style="border-style: solid; border-width: 1px"| colspan="6"|Result for GOPET search
 
|-
 
|-
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! style="border-style: solid; border-width: 1px"| GOid
!GOid
 
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! style="border-style: solid; border-width: 1px"| Aspect
!Aspect
 
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! style="border-style: solid; border-width: 1px"| Confidence
!Confidence
 
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! style="border-style: solid; border-width: 1px"| GO term
!GO term
 
 
|-
 
|-
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| style="border-style: solid; border-width: 1px"| GO:0016798
|GO:0016798
 
|Molecular Function Ontology (F)
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| style="border-style: solid; border-width: 1px"| Molecular Function Ontology (F)
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| style="border-style: solid; border-width: 1px"| 98%
|98%
 
|hydrolase activity acting on glycosyl bonds
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| style="border-style: solid; border-width: 1px"| hydrolase activity acting on glycosyl bonds
 
|-
 
|-
 
|}
 
|}

Revision as of 18:47, 8 May 2012

The following analyses were performed on the basis of the α-Galactosidase A sequence.

Secondary structure

Disorder

Transmembrane helices

Signal peptides

GO terms

GOPET

Searching the GOPET annotation tool with the AGAL_HUMAN sequence revealed 5 GOIds, which are displayed in <xr id="Tab:GOPET"/>..

colspan="6"|Result for GOPET search
GOid Aspect Confidence GO term
GO:0016798 Molecular Function Ontology (F) 98% hydrolase activity acting on glycosyl bonds

ProtFun2.0

Pfam