Difference between revisions of "Secondary Structure Prediction BCKDHA"
From Bioinformatikpedia
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!colspan=4" test |
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− | |Signal |
+ | |Signal |
+ | | 1 |
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+ | | 34 |
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+ | |Region |
+ | | 1 |
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+ | | 16 |
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+ | | N-Region |
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+ | |Region |
+ | | 17 |
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+ | | 25 |
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+ | | H-Region |
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+ | |Region |
+ | | 26 |
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+ | | 34 |
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+ | | C-Region |
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− | | TOPO_DOM |
+ | | TOPO_DOM |
+ | | 35 |
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+ | | 445 |
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+ | | non cytoplasmic |
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Revision as of 14:07, 24 May 2011
Contents
1. Secondary structure prediction
2. Prediction of disordered regions
3. Prediction of transmembrane alpha-helices and signal peptides
Phobius and Polyphobius
Phobius predicted a signal peptide with about 90% probability at the beginning of the sequence. The predicted signal peptide is 34 amino acids long. The rest of the amino acid is a non cytoplasmic protein sequence. No part of the protein is predicted to be transmembrane spanning.
colspan=4" test | |||
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Signal | 1 | 34 | |
Region | 1 | 16 | N-Region |
Region | 17 | 25 | H-Region |
Region | 26 | 34 | C-Region |
TOPO_DOM | 35 | 445 | non cytoplasmic |