Difference between revisions of "Example/Template"

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(Phenotype)
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== Phenotype ==
 
== Phenotype ==
Phenotypic description of the disease.
+
Phenotypic description of the disease.
  +
See also
 
  +
(Describe this in your own words, avoid plagiarism. Summarise the information from different sources.)
* link to Wikipedia
 
  +
* link to HGMD
 
  +
=== Cross-references ===
* link to Omim
 
  +
See also description of this disease in
...
 
  +
* specific link to Wikipedia
  +
* specific link to HGMD
  +
* specific link to OMIM
  +
... (see [[Resource data|databases in "resources"]])
   
 
== Biochemical disease mechanism ==
 
== Biochemical disease mechanism ==
 
The example protein is involved in the example pathway...
 
The example protein is involved in the example pathway...
  +
  +
Ideally, include a graphical pathway representation like this one: [[Image:SphingolipidMetabolism.png|frame|Sphingolipid Metabolism (source: KEGG) highlighting disease associated enzymes]]
  +
  +
(see above: own words, no plagiarism)
  +
  +
<br style="clear: both" />
  +
=== Cross-references ===
  +
* link to KEGG
  +
* link to MetaCyc
  +
... see [[Resource data|databases in "resources"]]
   
 
== Mutations ==
 
== Mutations ==
Current knowledge about mutations associated with the disease. - Separate into disease causing and neutral mutations.
+
Current knowledge about mutations associated with the disease. - Separate into disease causing and neutral mutations. -- These sequence pages will be the starting point for collecting prediction results and result discussions.
  +
  +
'''Note:''' Until further notice you only ''need to'' care about the reference sequence pages. -- At a later stage we will assign mutations we expect you to work on. Then, it will make sense to create on page per mutation that is assigned to you.
   
 
=== Reference sequence ===
 
=== Reference sequence ===
   
Which sequence does not cause the disease and is most often found in the population. -
+
Which sequence does not cause the disease and is most often found in the population.
* Create a page for the reference sequence.
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* [[example_sequence|Create a page for the reference sequence.]]
   
 
=== Neutral mutations ===
 
=== Neutral mutations ===
* [[example_mutation|Create one page per mutated sequence]].
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* [[example_sequence|Create one page per mutated sequence]].
   
 
=== Disease causing mutations ===
 
=== Disease causing mutations ===
* [[example_mutation|Create one page per mutated sequence]].
+
* [[example_sequence|Create one page per mutated sequence]].

Latest revision as of 11:17, 30 March 2012

Summary

The example disease causes the example syndrome.

Phenotype

Phenotypic description of the disease.

(Describe this in your own words, avoid plagiarism. Summarise the information from different sources.)

Cross-references

See also description of this disease in

  • specific link to Wikipedia
  • specific link to HGMD
  • specific link to OMIM

... (see databases in "resources")

Biochemical disease mechanism

The example protein is involved in the example pathway...

Ideally, include a graphical pathway representation like this one:

Sphingolipid Metabolism (source: KEGG) highlighting disease associated enzymes

(see above: own words, no plagiarism)


Cross-references

  • link to KEGG
  • link to MetaCyc

... see databases in "resources"

Mutations

Current knowledge about mutations associated with the disease. - Separate into disease causing and neutral mutations. -- These sequence pages will be the starting point for collecting prediction results and result discussions.

Note: Until further notice you only need to care about the reference sequence pages. -- At a later stage we will assign mutations we expect you to work on. Then, it will make sense to create on page per mutation that is assigned to you.

Reference sequence

Which sequence does not cause the disease and is most often found in the population.

Neutral mutations

Disease causing mutations