Difference between revisions of "Normal Mode Analysis of Glucocerebrosidase"

From Bioinformatikpedia
(→‎elNémo)
(→‎Elastic and Gaussian Network Models)
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=== WEBnm@ ===
  
=== WEBnm@ ===
   
  +
''' Results '''
−
=== ''elNémo'' ===
  
   
−
[[File:Elnemo_nm7_glucocerebrosidase.gif |thumb|center|500px|'''Figure 1:''' Normal Mode 7 calculated with ''elNémo'']]
  
−
[[File:Elnemo_nm8_glucocerebrosidase.gif |thumb|center|500px|'''Figure 2:''' Normal Mode 8 calculated with ''elNémo'']]
  
−
[[File:Elnemo_nm9_glucocerebrosidase.gif |thumb|center|500px|'''Figure 3:''' Normal Mode 9 calculated with ''elNémo'']]
  
−
[[File:Elnemo_nm10_glucocerebrosidase.gif |thumb|center|500px|'''Figure 4:''' Normal Mode 10 calculated with ''elNémo'']]
  
−
[[File:Elnemo_nm11_glucocerebrosidase.gif |thumb|center|500px|'''Figure 5:''' Normal Mode 11 calculated with ''elNémo'']]
  
   
  +
[[File:Webnma_nm7_glucocerebrosidase.gif |thumb|center|500px|'''Figure 1:''' Normal Mode 7 calculated with WEBnm@]]
  +
[[File:Webnma_nm8_glucocerebrosidase.gif |thumb|center|500px|'''Figure 2:''' Normal Mode 8 calculated with WEBnm@]]
  +
[[File:Webnma_nm9_glucocerebrosidase.gif |thumb|center|500px|'''Figure 3:''' Normal Mode 9 calculated with WEBnm@]]
  +
[[File:Webnma_nm10_glucocerebrosidase.gif |thumb|center|500px|'''Figure 4:''' Normal Mode 10 calculated with WEBnm@]]
  +
[[File:Webnma_nm11_glucocerebrosidase.gif |thumb|center|500px|'''Figure 5:''' Normal Mode 11 calculated with WEBnm@]]
   
  +
=== ''elNémo'' ===
   
 
''' Results '''
  
''' Results '''
  +
  +
  +
[[File:Elnemo_nm7_glucocerebrosidase.gif |thumb|center|500px|'''Figure 6:''' Normal Mode 7 calculated with ''elNémo'']]
  +
[[File:Elnemo_nm8_glucocerebrosidase.gif |thumb|center|500px|'''Figure 7:''' Normal Mode 8 calculated with ''elNémo'']]
  +
[[File:Elnemo_nm9_glucocerebrosidase.gif |thumb|center|500px|'''Figure 8:''' Normal Mode 9 calculated with ''elNémo'']]
  +
[[File:Elnemo_nm10_glucocerebrosidase.gif |thumb|center|500px|'''Figure 9:''' Normal Mode 10 calculated with ''elNémo'']]
  +
[[File:Elnemo_nm11_glucocerebrosidase.gif |thumb|center|500px|'''Figure 10:''' Normal Mode 11 calculated with ''elNémo'']]
   
 
''' Discussion '''
  
''' Discussion '''

Revision as of 23:03, 15 July 2011

Introduction

Elastic and Gaussian Network Models

WEBnm@

Results


Figure 1: Normal Mode 7 calculated with WEBnm@
Figure 2: Normal Mode 8 calculated with WEBnm@
Figure 3: Normal Mode 9 calculated with WEBnm@
Figure 4: Normal Mode 10 calculated with WEBnm@
Figure 5: Normal Mode 11 calculated with WEBnm@

elNémo

Results


Figure 6: Normal Mode 7 calculated with elNémo
Figure 7: Normal Mode 8 calculated with elNémo
Figure 8: Normal Mode 9 calculated with elNémo
Figure 9: Normal Mode 10 calculated with elNémo
Figure 10: Normal Mode 11 calculated with elNémo

Discussion

Anisotropic Network Model

oGNM

NOMAD-Ref

Discussion

All-atom NMA

Comparison NMA / MD

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