Difference between revisions of "Normal mode analysis HEXA"

From Bioinformatikpedia
(Results)
(Results)
Line 58: Line 58:
   
 
We took the first five models (7, 8, 9, 10, 11).
 
We took the first five models (7, 8, 9, 10, 11).
  +
  +
Here you can see the normalized squared atomic displacments of our models:
  +
  +
{| border="1" style="text-align:center; border-spacing:0;"
  +
|model 7
  +
|model 8
  +
|model 9
  +
|model 10
  +
|model 11
  +
|-
  +
|[[Image:webnma_model7.png|thumb|150px|normalized squared atomic displacments of model 7]]
  +
|[[Image:webnma_model8.png|thumb|150px|normalized squared atomic displacments of model 8]]
  +
|[[Image:webnma_model9.png|thumb|150px|normalized squared atomic displacments of model 9]]
  +
|[[Image:webnma_model10.png|thumb|150px|normalized squared atomic displacments of model 10]]
  +
|[[Image:webnma_model11.png|thumb|150px|normalized squared atomic displacments of model 11]]
  +
|-
  +
|}

Revision as of 10:25, 14 July 2011

Normal mode analysis

Webnma

General information

Results

We analysed the five models with the lowest energy values. Webnma calculates fourteen different models with following energy values:

Mode Index Deformation Energy
7 1041.88
8 1318.21
9 1738.30
10 2841.31
11 3135.09
12 4100.18
13 3911.06
14 5337.50
15 5741.69
16 6513.85
17 6081.05
18 6882.96
19 7514.14
20 7943.67

We took the first five models (7, 8, 9, 10, 11).

Here you can see the normalized squared atomic displacments of our models:

model 7 model 8 model 9 model 10 model 11
normalized squared atomic displacments of model 7
normalized squared atomic displacments of model 8
normalized squared atomic displacments of model 9
normalized squared atomic displacments of model 10
normalized squared atomic displacments of model 11