Difference between revisions of "Task 5 - Mapping SNPs Canavan"

From Bioinformatikpedia
(SNPdbe)
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=== SNPdbe ===
 
=== SNPdbe ===
  +
55 total, includes predicted functional effect. 29 of these 55 labelled as involved in Canavan Disease.
  +
[link to search http://www.rostlab.org/services/snpdbe/dosearch.php?id=name&val=aspa&organism2=human&organism1=]

Revision as of 15:27, 6 June 2012

First impression

HGMD

74 total for cDNA sequence NM_000049.2, out of which

  • 47 missense/nonsense
  • 5 splicing
  • 12 small deletions
  • 2 small insertions
  • 1 indel
  • 7 gross deletions


SNPdbe

55 total, includes predicted functional effect. 29 of these 55 labelled as involved in Canavan Disease. [link to search http://www.rostlab.org/services/snpdbe/dosearch.php?id=name&val=aspa&organism2=human&organism1=]