Difference between revisions of "TSD Modeller 3gh5 Edited Alignment"
From Bioinformatikpedia
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KRKAMRTDTAVGYSTLMPRAEITYQFVEDVISELAAISPSPYIHLGGD<font color=blue>'''E'''</font>SNAT----------------<font color=red>SAA |
KRKAMRTDTAVGYSTLMPRAEITYQFVEDVISELAAISPSPYIHLGGD<font color=blue>'''E'''</font>SNAT----------------<font color=red>SAA |
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DYDYFFGRVTAIANSY</font>----GKKVVGWDPS-DTSSGATSDSVLQNWTCSASTGTAAKAKGMKVIVSPANAYL |
DYDYFFGRVTAIANSY</font>----GKKVVGWDPS-DTSSGATSDSVLQNWTCSASTGTAAKAKGMKVIVSPANAYL |
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| − | DMKYYS<font color=blue>'''D'''</font>S-PIGLQWRGF- |
+ | DMKYYS<font color=blue>'''D'''</font>S-PIGLQWRGF-VNTNRAYNWDPTDCIKGANIYGVESTLWT<font color=blue>E</font>TFVTQDHLDYMLYPKLLSNAEVG |
WTARGDRNWDDFKERLIEHTPRLQNKGIKFFADPI<font color=red>V</font>---------* |
WTARGDRNWDDFKERLIEHTPRLQNKGIKFFADPI<font color=red>V</font>---------* |
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>P1;P06865 |
>P1;P06865 |
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Revision as of 14:12, 2 June 2012
>P1;3GH5 structureX:../../input/3GH5.pdb: -16 :A:+507 :A:MOL_ID 1; MOLECULE BETA-HEXOSAMINIDASE; CHAIN A; [...] HHHHSSGLVPRGSHMASMSQPSILPKPVSYTVGSGQFVLTKNASIFVAGNNVGETDELFNIGQALAKKLNAS TG-------YTISVVKSNQPTAGSIYLTTVGGN---AALGNEGYDLITTSNQVTLTANKPEGVFRGNQTLLQ LLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDEVKRQIDLASQYKINKFHMHLSDDQ GWRIEIKSWPDLIEIGSKGQVGGGPGGYYTQEQFKDIVSYAAERYIEVIPEIDMPGHTNAALASYGELNPDG KRKAMRTDTAVGYSTLMPRAEITYQFVEDVISELAAISPSPYIHLGGDESNAT----------------SAA DYDYFFGRVTAIANSY----GKKVVGWDPS-DTSSGATSDSVLQNWTCSASTGTAAKAKGMKVIVSPANAYL DMKYYSDS-PIGLQWRGF-VNTNRAYNWDPTDCIKGANIYGVESTLWTETFVTQDHLDYMLYPKLLSNAEVG WTARGDRNWDDFKERLIEHTPRLQNKGIKFFADPIV---------* >P1;P06865 sequence:: : : : :::-1.00:-1.00 MTSSRLWFSLLLAAAFAGRATALWPWPQNFQTSDQRYVLYPNNFQFQYDVSSAAQPGCSVLDEAFQRYRDLL FGSGSWPRPYLTGKRHTLEKNVLVVSVVTPGCNQLPTLESVENYTLTINDDQCLLLSETVWGALRGLETFSQ LVWKSAEGT-------FFINKTEIEDFPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLNVFHWHLVDDP SFPYESFTFPELMRKGSYNPVTH----IYTAQDVKEVIEYARLRGIRVLAEFDTPGHTLSWGPGIPGLLTPC YSGSEPSGT---FGPVNPSLNNTYEFMSTFFLEVSSVFPDFYLHLGGDEVDFTCWKSNPEIQDFMRKKGFGE DFKQLESFYIQTLLDIVSSYGKGYVVWQEVFDNKVKIQPDTIIQVWREDIPVNYMKELE--LVTKAGFRALL SAPWYLNRISYGPDWKDFYIVEPLAFEGTPE---QKALVIGGEACMWGE-YVDNTNLVPRLWPRAGAVAERL WSNKLTSDLTFAYERLSHFRCELLRRGVQAQPLNVGFCEQEFEQT*
