Difference between revisions of "Fabry:Sequence-based analyses"
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! style="border-style: solid; border-width: 1px"| GO term |
! style="border-style: solid; border-width: 1px"| GO term |
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|- align="center" |
|- align="center" |
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| − | | style="border-style: solid; border-width: 1px"| GO:0016798 |
+ | | style="border-style: solid; border-width: 1px"| [http://www.dkfz.de/menu/cgi-bin/srs/wgetz?-newId+-e+%5bGO-ID:0016798%5d GO:0016798] |
| style="border-style: solid; border-width: 1px"| Molecular Function Ontology (F) |
| style="border-style: solid; border-width: 1px"| Molecular Function Ontology (F) |
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| style="border-style: solid; border-width: 1px"| 98% |
| style="border-style: solid; border-width: 1px"| 98% |
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| style="border-style: solid; border-width: 1px"| hydrolase activity acting on glycosyl bonds |
| style="border-style: solid; border-width: 1px"| hydrolase activity acting on glycosyl bonds |
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|- align="center" |
|- align="center" |
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| − | | style="border-style: solid; border-width: 1px"| GO: |
+ | | style="border-style: solid; border-width: 1px"| [http://www.dkfz.de/menu/cgi-bin/srs/wgetz?-newId+-e+%5bGO-ID:0004553%5d GO:0004553] |
| style="border-style: solid; border-width: 1px"| Molecular Function Ontology (F) |
| style="border-style: solid; border-width: 1px"| Molecular Function Ontology (F) |
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| style="border-style: solid; border-width: 1px"| 98% |
| style="border-style: solid; border-width: 1px"| 98% |
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| − | | style="border-style: solid; border-width: 1px"| hydrolase activity |
+ | | style="border-style: solid; border-width: 1px"| hydrolase activity hydrolyzing O-glycosyl compounds |
|- align="center" |
|- align="center" |
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| − | | style="border-style: solid; border-width: 1px"| GO: |
+ | | style="border-style: solid; border-width: 1px"| [http://www.dkfz.de/menu/cgi-bin/srs/wgetz?-newId+-e+%5bGO-ID:0016787%5d GO:0016787] |
| style="border-style: solid; border-width: 1px"| Molecular Function Ontology (F) |
| style="border-style: solid; border-width: 1px"| Molecular Function Ontology (F) |
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| − | | style="border-style: solid; border-width: 1px"| |
+ | | style="border-style: solid; border-width: 1px"| 97% |
| − | | style="border-style: solid; border-width: 1px"| hydrolase activity |
+ | | style="border-style: solid; border-width: 1px"| hydrolase activity |
|- align="center" |
|- align="center" |
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| − | | style="border-style: solid; border-width: 1px"| GO: |
+ | | style="border-style: solid; border-width: 1px"| [http://www.dkfz.de/menu/cgi-bin/srs/wgetz?-newId+-e+%5bGO-ID:0004557%5d GO:0004557] |
| style="border-style: solid; border-width: 1px"| Molecular Function Ontology (F) |
| style="border-style: solid; border-width: 1px"| Molecular Function Ontology (F) |
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| − | | style="border-style: solid; border-width: 1px"| |
+ | | style="border-style: solid; border-width: 1px"| 96% |
| − | | style="border-style: solid; border-width: 1px"| |
+ | | style="border-style: solid; border-width: 1px"| alpha-galactosidase activity |
|- align="center" |
|- align="center" |
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| − | | style="border-style: solid; border-width: 1px"| GO: |
+ | | style="border-style: solid; border-width: 1px"| [http://www.dkfz.de/menu/cgi-bin/srs/wgetz?-newId+-e+%5bGO-ID:0008456%5d GO:0008456] |
| style="border-style: solid; border-width: 1px"| Molecular Function Ontology (F) |
| style="border-style: solid; border-width: 1px"| Molecular Function Ontology (F) |
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| − | | style="border-style: solid; border-width: 1px"| |
+ | | style="border-style: solid; border-width: 1px"| 89% |
| − | | style="border-style: solid; border-width: 1px"| |
+ | | style="border-style: solid; border-width: 1px"| alpha-N-acetylgalactosaminidase activity |
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Revision as of 18:02, 8 May 2012
The following analyses were performed on the basis of the α-Galactosidase A sequence.
Contents
Secondary structure
Disorder
Transmembrane helices
Signal peptides
GO terms
GOPET
Searching the GOPET annotation tool with the AGAL_HUMAN sequence revealed 5 GOIds, which are displayed in <xr id="Tab:GOPET"/>..
| Result for GOPET search | |||||
|---|---|---|---|---|---|
| GOid | Aspect | Confidence | GO term | ||
| GO:0016798 | Molecular Function Ontology (F) | 98% | hydrolase activity acting on glycosyl bonds | ||
| GO:0004553 | Molecular Function Ontology (F) | 98% | hydrolase activity hydrolyzing O-glycosyl compounds | ||
| GO:0016787 | Molecular Function Ontology (F) | 97% | hydrolase activity | ||
| GO:0004557 | Molecular Function Ontology (F) | 96% | alpha-galactosidase activity | ||
| GO:0008456 | Molecular Function Ontology (F) | 89% | alpha-N-acetylgalactosaminidase activity | ||
