Difference between revisions of "Mapping SNPs HEXA/DETAIL"
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+ | Each mutation pair is colored in the same color. If there are more than one possible pair by on mutation, we used different colors to visualize which amino acid would be result by different mutations. |
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+ | |||
<TABLE WIDTH=100% BORDER=1 BORDERCOLOR="#000000" CELLPADDING=4 CELLSPACING=0> |
<TABLE WIDTH=100% BORDER=1 BORDERCOLOR="#000000" CELLPADDING=4 CELLSPACING=0> |
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<TR VALIGN=TOP> |
<TR VALIGN=TOP> |
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</TD> |
</TD> |
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<TD WIDTH=10%> |
<TD WIDTH=10%> |
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− | <P>TGA TER</P> |
+ | <P><SPAN STYLE="background: #ff0000">TGA TER</SPAN></P> |
</TD> |
</TD> |
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<TD WIDTH=10%> |
<TD WIDTH=10%> |
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</TD> |
</TD> |
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<TD WIDTH=10%> |
<TD WIDTH=10%> |
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− | <P>TGG Trp</P> |
+ | <P><SPAN STYLE="background: #ff0000">TGG Trp</SPAN></P> |
</TD> |
</TD> |
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<TD WIDTH=10%> |
<TD WIDTH=10%> |
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</TD> |
</TD> |
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<TD WIDTH=10%> |
<TD WIDTH=10%> |
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− | <P>ATT</P> |
+ | <P>ATT Ile</P> |
− | <P>Ile</P> |
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</TD> |
</TD> |
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<TD WIDTH=10%> |
<TD WIDTH=10%> |
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− | <P>TTA</P> |
+ | <P>TTA Leu</P> |
− | <P>Leu</P> |
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</TD> |
</TD> |
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<TD WIDTH=10%> |
<TD WIDTH=10%> |
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− | <P>TAA</P> |
+ | <P>TAA TER</P> |
− | <P>TER</P> |
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</TD> |
</TD> |
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<TD WIDTH=10%> |
<TD WIDTH=10%> |
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− | <P>AAT</P> |
+ | <P>AAT Asn</P> |
− | <P>Asn</P> |
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</TD> |
</TD> |
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</TR> |
</TR> |
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</TD> |
</TD> |
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<TD WIDTH=10%> |
<TD WIDTH=10%> |
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− | <P>AAT</P> |
+ | <P>AAT Asn</P> |
− | <P>Asn</P> |
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</TD> |
</TD> |
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<TD WIDTH=10%> |
<TD WIDTH=10%> |
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− | <P>TAA</P> |
+ | <P>TAA TER</P> |
− | <P>TER</P> |
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</TD> |
</TD> |
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<TD WIDTH=10%> |
<TD WIDTH=10%> |
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− | <P>TTA</P> |
+ | <P>TTA Leu</P> |
− | <P>Leu</P> |
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</TD> |
</TD> |
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<TD WIDTH=10%> |
<TD WIDTH=10%> |
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− | <P>ATT</P> |
+ | <P>ATT Ile</P> |
− | <P>Ile</P> |
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</TD> |
</TD> |
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</TR> |
</TR> |
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</TD> |
</TD> |
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<TD WIDTH=10%> |
<TD WIDTH=10%> |
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− | <P>AAA |
+ | <P>AAA |
− | + | Lys</P> |
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</TD> |
</TD> |
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<TD WIDTH=10%> |
<TD WIDTH=10%> |
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− | <P>AAA |
+ | <P>AAA |
− | + | Lys</P> |
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</TD> |
</TD> |
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<TD WIDTH=10%> |
<TD WIDTH=10%> |
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− | <P>TTT |
+ | <P>TTT |
− | + | Leu</P> |
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</TD> |
</TD> |
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<TD WIDTH=10%> |
<TD WIDTH=10%> |
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− | <P>TTT |
+ | <P>TTT |
− | + | Phe</P> |
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</TD> |
</TD> |
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</TR> |
</TR> |
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</TABLE> |
</TABLE> |
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+ | <br><br> |
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+ | Back to [[http://i12r-studfilesrv.informatik.tu-muenchen.de/wiki/index.php/Mapping_SNPs_HEXA Mapping SNPs]]<br><br> |
Latest revision as of 15:25, 31 August 2011
Each mutation pair is colored in the same color. If there are more than one possible pair by on mutation, we used different colors to visualize which amino acid would be result by different mutations.
Codonposition |
Aminoacid |
Forward. |
Reverse |
Comp. forward |
Comp. reverse |
Forward mutation change |
Reverse mutation change |
Comp. Forward mutation change |
Komp. Reverse mutation change |
3 |
Ser |
TTC Phe |
CTT Leu |
AAG Lys |
GAA Glu |
CTC Leu |
CTC Leu |
GAG Glu |
GAG Glu |
|
|
GTT Val |
TTG Leu |
CAA Gln |
AAC Asn |
GCT Ala |
TCG Ser |
CGA Arg |
AGC Ser |
|
|
AGT Ser |
TGA TER |
TCA Ser |
ACT Thr |
AGC Ser |
CGA Arg |
TCG Ser |
GCT Ala |
|
|
|
|
|
|
|
|
|
|
29 |
Asn |
TTC Phe |
CTT Leu |
AAG Lys |
GAA Glu |
CTC Leu |
CTC Leu |
GAG Glu |
GAG Glu |
|
|
GTT Val |
TTG Leu |
CAA Gln |
AAC Asn |
GCT Ala |
TCG Ser |
CGA Arg |
AGC Ser |
|
|
TGT Cys |
TGT Gys |
ACA Thr |
ACA Thr |
TGC Cys |
CGT Arg |
ACG Thr |
GCA Ala |
|
|
|
|
|
|
|
|
|
|
109 |
Thr |
TTT Phe |
TTT Phe |
AAA Lys |
AAA Lys |
CTT Leu |
TTC Phe |
GAA Glu |
AAG Lys |
|
|
CTT Leu |
TTC Phe |
GAA Glu |
AAG Lys |
CCT Pro |
TCC Ser |
GGA Gly |
AGG Arg |
|
|
ACT Thr |
TCA Ser |
TGA TER |
AGT Ser |
ACC Thr |
CCA Pro |
TGG Trp |
GGT Gly |
|
|
|
|
|
|
|
|
|
|
179 |
His |
GTA Val |
ATG Met |
CAT His |
TAC Tyr |
CTA Leu |
ATC Ile |
GAT Asp |
TAG TER |
|
|
AGT Ser |
TGA TER |
TCA Tyr |
ACT Thr |
ACT Thr |
TCA Ser |
TCA Ser |
ACT Thr |
|
|
GAG Glu |
GAG Glu |
CTC Leu |
CTC Leu |
GAC Asp |
CAG Gln |
CTG Leu |
GTC Val |
|
|
|
|
|
|
|
|
|
|
203 |
Trp |
TGA TER |
AGT Ser |
ACT Thr |
TCA Ser |
CGA Arg |
AGC Ser |
GCT Ala |
TCG Ser |
|
|
CTG Leu |
GTC Val |
GAC Ala |
CAG Gln |
CCG Pro |
GCC Ala |
GGC Gly |
CGG Arg |
|
|
ACT Thr |
TCA Ser |
TGA TER |
AGT Ser |
ACC Thr |
CCA Pro |
TGG Trp |
GGT Gly |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
208 |
D Asp |
TTG Leu |
GTT Val |
AAC Asn |
CAA Gln |
CTG Leu |
GTC Val |
GAC Asp |
CAG Gln |
|
|
ATT Ile |
TTA Leu |
TAA TER |
AAT Asn |
ACT Thr |
TCA Ser |
TGA TER |
AGT Met |
|
|
TAT Tyr |
TAT Tyr |
ATA Ile |
ATA Ile |
TAC Tyr |
CAT His |
ATG Met |
GTA Val |
|
|
|
|
|
|
|
|
|
|
248 |
Leu |
GAA Glu |
AAG Lys |
CTT Leu |
TTC Phe |
AAA Lys |
AAA Lys |
TTT Phe |
TTT Phe |
|
|
CGA Arg |
AGC Ser |
GCT Ala |
TCG Ser |
CAA Gln |
AAC Asn |
GTT Val |
TTG Leu |
|
|
CCG Pro |
GCC Ala |
GGC Gly |
CGG Arg |
CCA Pro |
ACC Thr |
GGT Gly |
TGG Trp |
|
|
|
|
|
|
|
|
|
|
324 |
Val |
TGA TER |
AGT Ser |
ACT Thr |
TCA Ser |
AGA Arg |
AGA Arg |
TCT Ser |
TCT Ser |
|
|
TTG Leu |
GTT Val |
AAC Asn |
CAA Gln |
TAG TER |
GAT Asp |
ATC Ile |
CTA Leu |
|
|
GTT Val |
TTG Leu |
CAA Gln |
AAC Asn |
GTA Val |
ATG Met |
CAT His |
TAC Tyr |
|
|
|
|
|
|
CGA Arg |
AGC Ser |
GCT Ala |
TCG Ser |
|
|
|
|
|
|
TCG Ser |
GCT Ala |
AGC Arg |
CGA Arg |
|
|
|
|
|
|
GTC Val |
CTG Leu |
CAG Gln |
GAC Asp |
|
|
|
|
|
|
|
|
|
|
446 |
Pro |
GGG Gly |
GGG Gly |
CCC Pro |
CCC Pro |
AGG Arg |
GGA Gly |
TCC Ser |
CCT Pro |
|
|
CGG Arg |
GGC Gly |
GCC Ala |
CCG Pro |
CAG Gln |
GAC Asp |
GTC Val |
CTG Leu |
|
|
TCG Ser |
GCT Ala |
AGC Ser |
CGA Arg |
TCA Ser |
ACT Thr |
AGT Arg |
TGA TER |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
476 |
Arg |
GTT Gly |
TTG Leu |
CAA Gln |
AAC Asn |
ATT Ile |
TTA Leu |
TAA TER |
AAT Asn |
|
|
AGT Ser |
TGA TER |
TCA Ser |
ACT Thr |
AAT Asn |
TAA TER |
TTA Leu |
ATT Ile |
|
|
AAG Lys |
GAA Glu |
TTC Phe |
CTT Leu |
AAA Lys |
AAA Lys |
TTT Leu |
TTT Phe |
Back to [Mapping SNPs]