Difference between revisions of "Pedigree Chart Visualization"
From Protein Prediction 2 Winter Semester 2014
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| + | A pedigree chart is a simple and easy to read diagram showing the occurrence and appearance or phenotypes of a particular gene in an organism and its ancestors. Pedigrees use a standardized set of symbols: |
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| − | You can use these notes as template for your presentation. |
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| + | *squares: males |
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| − | (It is always great to add your own, custom flavor) |
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| + | *circles: females |
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| + | *diamonds: the sex of the person is unknown |
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| + | *filled-in (darker) symbol: someone with the phenotype in question |
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| + | *shaded or half-filled symbol: heterozygotes |
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| + | *horizontal and a vertical line: connects parents to their offspring |
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| + | *.... |
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| + | |||
| − | === 1. GUI mockups === |
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| + | === Project Ideas === |
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| + | |||
| + | |||
| + | === GUI mockups === |
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* User experience |
* User experience |
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Tip: showing some images (Photoshop, Gimp, Inkscape, ...) makes it easier to follow your ideas |
Tip: showing some images (Photoshop, Gimp, Inkscape, ...) makes it easier to follow your ideas |
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| − | === |
+ | === Application design === |
* Expected technical difficulties |
* Expected technical difficulties |
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* Fancy libraries you plan to use |
* Fancy libraries you plan to use |
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| + | .[[File:dataFormat.png|350px|right|thumb|tree.json]] |
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| − | === 3. Your data === |
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| + | === Your data === |
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| − | * D3 layouts requires specific data structure for trees. ('''tree.json''') |
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| − | [[File:dataFormat.png]] |
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| + | * D3 layouts requires specific data structure for trees |
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| − | === 4. Roadmap === |
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| + | === Roadmap === |
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* Week 1 |
* Week 1 |
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| + | * Week 2 |
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Latest revision as of 06:15, 19 November 2014
A pedigree chart is a simple and easy to read diagram showing the occurrence and appearance or phenotypes of a particular gene in an organism and its ancestors. Pedigrees use a standardized set of symbols:
- squares: males
- circles: females
- diamonds: the sex of the person is unknown
- filled-in (darker) symbol: someone with the phenotype in question
- shaded or half-filled symbol: heterozygotes
- horizontal and a vertical line: connects parents to their offspring
- ....
Project Ideas
GUI mockups
- User experience
- Functionality & Features
| Appearance | Calculation | Others |
|---|---|---|
| Color Scheme | Auto probability | Tool Tip |
| Shape Selection | Auto connection (while changing affected nodes) |
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| Vertical/Horizontal Selection | Scaling |
Tip: showing some images (Photoshop, Gimp, Inkscape, ...) makes it easier to follow your ideas
Application design
- Expected technical difficulties
- Fancy libraries you plan to use
Your data
- D3 layouts requires specific data structure for trees
Roadmap
- Week 1
- Week 2
