Homework 5

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Tasks, due Nov 20

  • get in contact with your mentor(s)
  • create a wiki entry for your project and link it here
  • create a blueprint for your component (3-4 min. presentation to the course), upload the file in pdf on our wiki (using the 'Upload file' on the left side of the wiki page) and link it in the table below
Student names Project name (expected # of students) Mentor(s) Wiki entry Blueprint (pdf)
Sven Punga, Benedikt Rauscher Dot-Bracket Notation (2) Björn Grüning Dot-Bracket Notation File:Pp2-präsi.pdf
Enrico Gigantiello, Sai Kiran Krishna Murthy, Carlo Di Domenico Parser for GenBank format and visualization of annotations Khalil El Mazouari Genbank Parser File:GeneBank_Parsing_Blueprint_.pdf‎
Prapaporn Dangnoy, Madhura Kumaraswamy, Maribel Guzman Sub-cellular localization in a cell Tatyana, Juanmi Sub-cellular Localization in a cell File:3BioGirls_Presentation1.pdf‎
Akshit Malhotra, Vinod Rajendran, Irman Abdic Visualization of iAnn events Manuel Corpas Visualization of iAnn events

File:Visualization_iAnn_viewer.pdf‎‎

Homa Rasouli, Sebastian Wilzbach BLAST Visualization Xavier Watkins BLAST Visualization File:Blast-Visoalization.pdf
Ahsan ziaullah, Vasantha kumari kommanapalli, Anuradha Ganapathi FORCE DIRECTED NETWORK (SPRING ALGORITHM) GRAPH VIEWER Sebastian, David, Björn Grüning FORCE DIRECTED NETWORK File:Blue_Print.pdf‎
Habtom Kahsay Gidey, Mohamed Ahmed Gene List Venn Diagram Visualization David, Sebastian gene.list.venn.project File:VennProject.pdf
Agon Lohaj, Bardh, Lohaj HSSP Curve Juanmi, Tatyana HSSP Live Example File:HSSP_Curve_Visualisation_Project_Blueprint.pdf‎
Matheus Raszl, Diana Papyan RNA Microarray Tatyana, Juanmi RNA Microarray

File:PP2_WS1415_RASZL_PAPYAN.pdf